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Today's Topics:
1. WABI 2016 - Second Call for Papers (Christian Storm Pedersen)
2. 2nd Workshop on Algorithmic Game Theory at IJCAI -- Final
call for papers (Carmine Ventre)
3. PhD job advert at Copenhagen Business School
(Dolores Romero Morales)
4. 2nd CFC PACE 2016 - The 1st Parameterized Algorithms and
Computational Experiments Challenge (Christian Komusiewicz)
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Message: 1
Date: Sun, 17 Apr 2016 09:18:34 +0000
From: Christian Storm Pedersen <cstorm@birc.au.dk>
To: "dmanet@zpr.uni-koeln.de" <dmanet@zpr.uni-koeln.de>
Subject: [DMANET] WABI 2016 - Second Call for Papers
Message-ID: <96B2C755-FD88-48F4-8566-3B909124B520@birc.au.dk>
Content-Type: text/plain; charset="utf-8"
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WABI 2016 - Second Call for Papers
16th Workshop on Algorithms in Bioinformatics
August 22-24, 2016. Aarhus, Denmark
===================================================================
Submission deadline: May 2, 2016
http://conferences.au.dk/algo16/wabi
===================================================================
Scope:
All research in algorithmic work in bioinformatics, computational biology and systems biology. The emphasis is mainly on discrete algorithms and machine-learning methods that address important problems in molecular biology, that are founded on sound models, that are computationally efficient, and that have been implemented and tested in simulations and on real datasets. The goal is to present recent research results, including significant work-in-progress, and to identify and explore directions of future research.
Topics:
Original research papers (including significant work-in-progress) or state-of-the-art surveys are solicited in all aspects of algorithms in bioinformatics, computational biology and systems biology - including, but not limited to:
* Exact and approximate algorithms for sequence analysis, gene and signal recognition, alignment and assembly, molecular evolution, structure determination or prediction, gene expression, molecular pathways and networks, proteomics, functional and comparative genomics, and drug design.
* Methods, software, and data repositories for development and testing of such algorithms and their underlying models, as well as high-performance computing approaches to hard learning and optimization problems.
* Novel approaches to analyzing and modeling next-generation sequence data, including sequence assembly, population genomics, metagenomics, metatranscriptomics and small RNA sequencing.
Important Dates:
Submission deadline: May 2, 2016
Author notification: May 30, 2016
Final version due: June 13, 2016
Workshop: August 22-24, 2016
Keynote Speaker:
Kiyoshi Asai, University of Tokyo, Japan.
Details on submitting manuscripts:
See http://conferences.au.dk/algo16/wabi under 'Paper Submission' for details.
Proceedings:
Proceedings will be published in the Springer series Lecture Notes in
Bioinformatics, where accepted papers will be allotted 12 pages.
Selected papers will also be invited for an extended publication in a
thematic series in Algorithms for Molecular Biology (AMB).
Program Committee:
Tatsuya Akutsu, Kyoto University
Timothy L. Bailey, University of Queensland
Jan Baumbach, University of Southern Denmark
Anne Bergeron, Universite du Quebec a Montreal
Paola Bonizzoni, Universita di Milano-Bicocca
Alessandra Carbone, Universite Pierre et Marie Curie
Rita Casadio, University of Bologna
Nadia El-Mabrouk, University of Montreal
Martin Frith (co-chair), AIST
Anna Gambin, Warsaw University
Raffaele Giancarlo, Dipartimento di Matematica Universita di Palermo
Michiaki Hamada, Waseda University
Thomas Hamelryck, University of Copenhagen
Fereydoun Hormozdiari, University of California Davis
Katharina Huber, University of East Anglila
Carl Kingsford, Carnegie Mellon University
Hisanori Kiryu, The University of Tokyo
Gregory Kucherov, University Paris-Est Marne-la-Vallee
Timo Lassmann, Telethon Kids Institute
Ming Li, University of Waterloo
Zsuzsanna Liptak, University of Verona
Stefano Lonardi, University of California Riverside
Gerton Lunter, University of Oxford
Thomas Mailund, Aarhus University
Paul Medvedev, Pennsylvania State University
Daniel Merkle, University of Southern Denmark
Istvan Miklos, Rnyi Institute, Budapest
Bernard Moret, EPFL
Burkhard Morgenstern, University of Goettingen
Vincent Moulton, University of East Anglia
Veli Mäkinen, University of Helsinki
Luay Nakhleh, Rice University
William Noble, University of Washington
Christian Nørgaard Storm Pedersen (co-chair), Aarhus University
Nadia Pisanti, Universita di Pisa
Mihai Pop, University of Maryland
Teresa Przytycka, NIH
Sven Rahmann, University of Duisburg-Essen
Marie-France Sagot, INRIA
Kengo Sato, Keio University
Michael Schatz, Cold Spring Harbor Laboratory
Russell Schwartz, Carnegie Mellon University
Kana Shimizu, AIST
Anish Man Sing Shrestha, University of Tokyo
Peter F. Stadler, Leipzig University
Jens Stoye, Bielefeld University
Krister Swenson, Universite de Montpellier
Hélène Touzet, University of Lille
Lusheng Wang, City University of Hong Kong
Siu Ming Yiu, The University of Hong Kong
Louxin Zhang, National University of Singapore
Michal Ziv-Ukelson, Ben Gurion University of the Negev
--
Christian Nørgaard Storm Pedersen
Bioinformatics Research Center (BiRC), Aarhus University
http://www.birc.au.dk/~cstorm
------------------------------
Message: 2
Date: Mon, 18 Apr 2016 10:00:17 +0100
From: Carmine Ventre <C.Ventre@tees.ac.uk>
To: dmanet@zpr.uni-koeln.de
Subject: [DMANET] 2nd Workshop on Algorithmic Game Theory at IJCAI --
Final call for papers
Message-ID:
<CAEg4AOXuDpGH=Y5k+N97yx-Odx7GE9MY_TTC2u7+f_FC10b_+g@mail.gmail.com>
Content-Type: text/plain; charset=UTF-8
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AGT@IJCAI 2016 Call for Papers
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2nd Workshop on Algorithmic Game Theory at IJCAI
New York
July 11, 2016
http://www.gametheory.polimi.it/agtijcai.html
-----------------------------------------------------------------------
Deadlines:
April 27, 2016 - Submission of contributions to workshops;
May 25, 2016 - Workshop paper acceptance notification;
May 30, 2015 - Deadline for final camera ready copy to workshop organizers.
-----------------------------------------------------------------------
Scope:
Over the past fifteen years, research in theoretical computer science,
artificial intelligence, and microeconomics has joined forces to
tackle problems involving incentives and computation. This research
field, commonly named Algorithmic Game Theory, is becoming
increasingly more relevant.
The main aim of this one-day long workshop is to bring together the
rich variety of scientists that IJCAI attracts in order to have a
multidisciplinary forum within which discuss and analyze current and
novel challenges that the research in Algorithmic Game Theory faces.
Submission:
All paper submissions will be peer-reviewed and evaluated on the basis
of the quality of their contribution, originality, significance, and
the potential to generate fruitful discussions. Industrial
applications and position papers presenting novel ideas, issues,
challenges and directions are also welcome. Submissions are invited
in, but not limited to, the following topics:
- Algorithmic mechanism design
- Auction algorithms and analysis
- Behavioral Game Theory
- Bounded rationality
- Computational advertising
- Computational aspects of equilibria
- Computational social choice
- Convergence and learning in games
- Coalitions, coordination and collective action
- Economic aspects of security and privacy
- Economic aspects of distributed and network computing
- Information and attention economics
- Network games
- Price differentiation and price dynamics
- Social networks
Submission Guidelines:
Authors are invited to submit a paper of no more than 16 pages,
including references, in LNCS style. All submissions will be
electronic via the EasyChair page for the conference at
https://easychair.org/conferences/?conf=agtijcai2016. Submissions must
adhere to the specified format and length. All the technical details
that are necessary for a proper scientific evaluation of a submission
must be included in a clearly-labelled appendix, to be consulted at
the discretion of program committee members. Please note that
reviewing will not be double-blinded.
Proceedings Publication:
To widen participation and encourage discussion, there will be no
formal publication of workshop proceedings. (We will, however, post
the accepted papers online to the benefit of the participants to the
workshop.) Therefore, submissions of preliminary work and papers to be
submitted or in preparation for submission to other major venues in
the field are encouraged.
-----------------------------------------------------------------------
Program Committee:
Ioannis Caragiannis (University of Patras)
Edith Elkind (University of Oxford)
Diodato Ferraioli (Università di Salerno)
Vasilis Gkatzelis (Berkeley University)
Enrico Gerding (University of Southampton)
Gianluigi Greco (Università della Calabria)
Umberto Grandi (University of Toulouse)
Nicole Immorlica (Northwestern University)
Ian Kash (Microsoft Research Cambridge)
Jérôme Lang (LAMSADE)
Kate Larson (University of Waterloo)
Emiliano Lorini (IRIT)
Evangelos Markakis (Athens University of Economics and Business)
Valentin Robu (Heriot-Watt University, Edinburgh)
Eva Tardos (Cornell University)
Orestis Telelis (Department of Digital Systems, University of Piraeus)
Vijay V. Vazirani (Georgia Tech University)
Angelina Vidali (Teesside University)
Toby Walsh (NICTA and UNSW)
-----------------------------------------------------------------------
Organizing Committee:
Georgios Chalkiadakis (Technical University of Crete)
Nicola Gatti (Politecnico di Milano)
Reshef Meir (Technion-Israel Institute of Technology)
Carmine Ventre (Teesside University)
-----------------------------------------------------------------------
------------------------------
Message: 3
Date: Mon, 18 Apr 2016 09:45:04 +0000
From: Dolores Romero Morales <drm.eco@cbs.dk>
To: "dmanet@zpr.uni-koeln.de" <dmanet@zpr.uni-koeln.de>
Subject: [DMANET] PhD job advert at Copenhagen Business School
Message-ID: <D33A7725.59BD4%drm.eco@cbs.dk>
Content-Type: text/plain; charset="us-ascii"
The Department of Economics at the Copenhagen Business School invites
applications for two vacant PhD scholarships within a variety of
disciplines, including Operations Research.
Closing date: 09/05/2016
Link to application:
http://www.cbs.dk/en/about-cbs/jobs-cbs/vacant-positions/phd-scholarships-i
n-economics
Contact:
Dr Dolores Romero Morales
Professor in Operations Research
Copenhagen Business School
E: drm.eco@cbs.dk
H: www.doloresromero.com
------------------------------
Message: 4
Date: Mon, 18 Apr 2016 14:38:14 +0200
From: Christian Komusiewicz <christian.komusiewicz@uni-jena.de>
To: dmanet@zpr.uni-koeln.de
Subject: [DMANET] 2nd CFC PACE 2016 - The 1st Parameterized Algorithms
and Computational Experiments Challenge
Message-ID: <5714D536.5040902@uni-jena.de>
Content-Type: text/plain; charset=utf-8; format=flowed
Individuals and teams are invited to compete in the 1st Parameterized
Algorithms and Computational Experiments Challenge (PACE 2016) which is
respectfullydedicated to the memory of Professor David Johnson, a
Computer Science leader and visionary. Benchmark instances and
submission requirements are available at the challenge website
pacechallenge.wordpress.com <https://pacechallenge.wordpress.com>.
The challenge has two different tracks:
Track A "Tree Width": optimal solutions, heuristics, generating hard
instances, and collecting real-world instances.
Track B "Feedback Vertex Set": fixed-parameter algorithms.
IMPORTANT DATES:
----------------
- 1 March 2016: Call for contributions; benchmark instances available.
- 1 June 2016: Register participation (see pacechallenge.wordpress.com
<https://pacechallenge.wordpress.com> for details).
- 1 August 2016: DEADLINE to submit implementations.
- 22–26 August 2016: Results announced at the International Symposium
on Parameterized and Exact Computation (IPEC 2016
<http://conferences.au.dk/algo16/ipec/>).
Participants of PACE are highly encouraged to submit manuscripts
describing their contributions to other publication venues such as IPEC
and arXiv.org. We also encourage the use of the provided benchmark
instances.
GOALS:
------
PACE investigates the applicability of algorithmic ideas studied and
developed in the subfields of multivariate, fine-grained, parameterized,
or fixed-parameter algorithms. It aims to:
- Bridge between algorithms design and analysis theory and algorithm
engineering practice.
- Inspire new theoretical developments.
- Produce universally accessible libraries of implementations and
repositories of benchmark instances.
- Encourage the dissemination of these findings in scientific papers.
Program Committee:
------------------
TRACK A:
- Holger Dell, Saarland University and Simons Institute for the Theory
of Computing
- Thore Husfeldt, Lund University and IT University of Copenhagen
TRACK B:
- Falk Hüffner, TU Berlin
- Christian Komusiewicz, Friedrich Schiller University Jena
PACE Steering Committee:
------------------------
- Holger Dell, Saarland University and Simons Institute for the Theory
of Computing
- Thore Husfeldt, Lund University and IT University of Copenhagen
- Bart M. P. Jansen, Eindhoven University of Technology
- Petteri Kaski, Aalto University
- Christian Komusiewicz, Friedrich Schiller University Jena
- Amer Mouawad, University of Bergen
- Frances Rosamond (chair), University of Bergen
More information can be found on pacechallenge.wordpress.com
<https://pacechallenge.wordpress.com>.
k
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