Wednesday, February 5, 2014

dmanet Digest, Vol 72, Issue 5

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Today's Topics:

1. CfP, IFORS 2014, Hyper-heuristics Stream and sessions
(Andrew Parkes)
2. AlCoB 2014: extended submission deadline 11 February (GRLMC)
3. Call for participation: LOT - In memory of Professor Arne
L?kketangen (Hoff Arild)
4. CFP: The Second International Workshop on Vehicular Traffic
Management for Smart Cities (VTM 2014) (Kacimi Rahim)
5. Special issue of Discrete Applied Mathematics dedicated to
GROW 2013 (Dimitrios Thilikos)


----------------------------------------------------------------------

Message: 1
Date: Tue, 04 Feb 2014 12:18:17 +0000
From: Andrew Parkes <andrew.parkes@nottingham.ac.uk>
To: "dmanet@zpr.uni-koeln.de" <dmanet@zpr.uni-koeln.de>
Subject: [DMANET] CfP, IFORS 2014, Hyper-heuristics Stream and
sessions
Message-ID: <52F0DA89.90907@nottingham.ac.uk>
Content-Type: text/plain; charset=ISO-8859-1; format=flowed

(apologies for multiple postings):

Dear Colleagues

You are invited to present work in the area of hyper-heuristics (or
adaptive control of search in general) in the hyper-heuristics stream,
in the Metaheuristics and Matheuristics area, at the IFORS conference in
Barcelona in July 2014 (http://ifors2014.org/).

All contributions are most welcome. Some ideas for topics that
could be addressed are, but not limited to:
- hyper-heuristics interfaces and their roles within general
optimisation frameworks
- general control of search and meta-heuristics
- applications of hyper-heuristics (or similar methods) to optimisation
problems
- automated support for the generation of heuristics (including genetic
programming, etc)
- control of algorithm configuration and parameters

To submit an abstract, please visit http://ifors2014.upc.edu/abstract
Your abstract can contain up to 600 characters (but no mathematical
notation).
(For anyone unfamiliar with IFORS/EURO conferences, no paper is
required in order to give a talk only submission of the very short
abstract).

To submit to one of the following invited sessions, please use the given
session invitation code:

Session: Hyperheuristics: Interfaces, Implementations and Applications
Chairs: Shahriar Asta and Daniel Karapetyan
Invitation code: : f9612ae1

Session: Algorithm Configuration: black, white and gray box
Chair: Patrick De Causmaecker
Invitation code: 6c079914

(Fuller desriptions of the sessions are given below.)

Submission deadline: 10th February 2014.

If you have any questions, please feel free to contact me.

best regards,
Andrew Parkes ajp@cs.nott.ac.uk

Fuller descriptions for the sessions:

Title: Hyperheuristics: Interfaces, Implementations and Applications
Chairs: Shahriar Asta and Daniel Karapetyan
Session invitation code: : f9612ae1
Description:
Abstracts are sought in the area of Hyperheuristics. Suggested
categories (but not limited to):
- Cross-domain benchmark platforms
- Reusable frameworks
- Open source and cross-platform implementations
- Parallel and concurrent implementations
- Practical and theoretical applications
- Case studies
- New problem domains and instance sets
- Hyperheuristics vs. metaheuristics
- Problem representation

Title: Algorithm Configuration: black, white and gray box
Chair: Patrick De Causmaecker
Session invitation code: 6c079914
Description:
The task of automated (off-line) algorithm configuration includes
finding a good parameter configuration for an algorithm based on some
performance measure and a problem instance distribution. This could be
considered as an expensive optimization problem. Currently, most
algorithms treat the target (configured) algorithm as a black-box, i.e.,
only the final result of each run of the target algorithm on a problem
instance is taken into account. If we "open the box", we could have a
gray-box or even a white-box configuration problem. An example of a
gray-box configuration problem could be the case when the target
algorithm is local search, and the collected information is the solution
obtained after each iteration. The box could be considered whiter when
more detail of the algorithm is used. We invite speakers to present
initial or advanced research concerning this issue.

This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please send it back to me, and immediately delete it. Please do not use, copy or disclose the information contained in this message or in any attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham.

This message has been checked for viruses but the contents of an attachment
may still contain software viruses which could damage your computer system, you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.






------------------------------

Message: 2
Date: Tue, 4 Feb 2014 13:23:35 +0100
From: "GRLMC" <grlmc@urv.cat>
To: <dmanet@zpr.uni-koeln.de>
Subject: [DMANET] AlCoB 2014: extended submission deadline 11 February
Message-ID: <9F8CB339C06644D6ABA2C0354747F2D3@Carlos1>
Content-Type: text/plain; charset="iso-8859-1"

*To be removed from our mailing list, please respond to this message with
UNSUBSCRIBE in the subject line*

----------------------------------------------------------------------------
***** SUBMISSION DEADLINE EXTENDED: February 11 *****
----------------------------------------------------------------------------

*********************************************************************

1st INTERNATIONAL CONFERENCE ON ALGORITHMS FOR COMPUTATIONAL BIOLOGY

AlCoB 2014

Tarragona, Spain

July 1-3, 2014

Organized by:

Research Group on Mathematical Linguistics (GRLMC)
Rovira i Virgili University

http://grammars.grlmc.com/alcob2014/

*********************************************************************


AIMS:

AlCoB aims at promoting and displaying excellent research using string and
graph algorithms and combinatorial optimization to deal with problems in
biological sequence analysis, genome rearrangement, evolutionary trees, and
structure prediction.

The conference will address several of the current challenges in
computational biology by investigating algorithms aimed at: 1) assembling
sequence reads into a complete genome, 2) identifying gene structures in the
genome, 3) recognizing regulatory motifs, 4) aligning nucleotides and
comparing genomes, 5) reconstructing regulatory networks of genes, and 6)
inferring the evolutionary phylogeny of species.

Particular focus will be put on methodology and significant room will be
reserved to young scholars at the beginning of their career.

VENUE:

AlCoB 2014 will take place in Tarragona, located 90 kms. to the south of
Barcelona. The venue will be the Catalunya Campus.

SCOPE:

Topics of either theoretical or applied interest include, but are not
limited to:

Exact sequence analysis
Approximate sequence analysis
Pairwise sequence alignment
Multiple sequence alignment
Sequence assembly
Genome rearrangement
Regulatory motif finding
Phylogeny reconstruction
Phylogeny comparison
Structure prediction
Compressive genomics
Proteomics: molecular pathways, interaction networks ...
Transcriptomics: splicing variants, isoform inference and quantification,
differential analysis ?
Next-generation sequencing: population genomics, metagenomics,
metatranscriptomics ...
Microbiome analysis
Systems biology

STRUCTURE:

AlCoB 2014 will consist of:

invited talks
invited tutorials
peer-reviewed contributions

INVITED SPEAKERS:

Michael Galperin (National Center for Biotechnology Information, Bethesda),
Comparative Genomics Approaches to Identifying Functionally Related Genes

Uwe Ohler (Max-Delbr?ck Centre for Molecular Medicine, Berlin), Decoding
Non-coding Regulatory Regions in DNA and RNA (tutorial)

Jason Papin (University of Virginia, Charlottesville), Network Analysis of
Microbial Pathogens

PROGRAMME COMMITTEE:

Tatsuya Akutsu (Kyoto, JP)
Amihood Amir (Ramat-Gan, IL)
Alberto Apostolico (Atlanta, US)
Joel Bader (Baltimore, US)
Pierre Baldi (Irvine, US)
Serafim Batzoglou (Stanford, US)
Bonnie Berger (Cambridge, US)
Francis Y.L. Chin (Hong Kong, HK)
Benny Chor (Tel Aviv, IL)
Keith A. Crandall (Washington, US)
Bhaskar DasGupta (Chicago, US)
Joaqu?n Dopazo (Valencia, ES)
Liliana Florea (Baltimore, US)
Olivier Gascuel (Montpellier, FR)
David Gilbert (Uxbridge, UK)
Gaston H. Gonnet (Zurich, CH)
Roderic Guig? (Barcelona, ES)
Dan Gusfield (Davis, US)
Vasant Honavar (University College, US)
Sorin Istrail (Providence, US)
Tao Jiang (Riverside, US)
Inge Jonassen (Bergen, NO)
Anders Krogh (Copenhagen, DK)
Giovanni Manzini (Alessandria, IT)
Carlos Mart?n-Vide (Tarragona, ES, chair)
Satoru Miyano (Tokyo, JP)
Burkhard Morgenstern (G?ttingen, DE)
Shinichi Morishita (Tokyo, JP)
C?dric Notredame (Barcelona, ES)
Graziano Pesole (Bari, IT)
Mark Ragan (Brisbane, AU)
Timothy Ravasi (Thuwal, SA)
Allen G. Rodrigo (Durham, US)
Steven Salzberg (Baltimore, US)
David Sankoff (Ottawa, CA)
Thomas Schiex (Toulouse, FR)
Jo?o C. Setubal (S?o Paulo, BR)
Steven Skiena (Stony Brook, US)
Peter F. Stadler (Leipzig, DE)
Wing-Kin Sung (Singapore, SG)
Alfonso Valencia (Madrid, ES)
Jacques van Helden (Marseille, FR)
Arndt von Haeseler (Vienna, AT)
Lusheng Wang (Hong Kong, HK)
Limsoon Wong (Singapore, SG)
Xiaohui Xie (Irvine, US)
Dong Xu (Columbia, US)
Zohar Yakhini (Santa Clara, US)
Alex Zelikovsky (Atlanta, US)
Michael Q. Zhang (Dallas, US)

ORGANIZING COMMITTEE:

Adrian Horia Dediu (Tarragona)
Carlos Mart?n-Vide (Tarragona, chair)
Bianca Truthe (Magdeburg)
Florentina Lilica Voicu (Tarragona)

SUBMISSIONS:

Authors are invited to submit non-anonymized papers in English presenting
original and unpublished research. Papers should not exceed 12 single-spaced
pages (including eventual appendices) and should be formatted according to
the standard format for Springer Verlag's LNCS series (see
http://www.springer.com/computer/lncs?SGWID=0-164-6-793341-0).

Submissions have to be uploaded to:

https://www.easychair.org/conferences/?conf=alcob2014

PUBLICATIONS:

A volume of proceedings published by Springer in the LNCS/LNBI series will
be available by the time of the conference.

A special issue of IEEE/ACM Transactions on Computational Biology and
Bioinformatics (TCBB, 2012 impact factor: 1.616) will be later published
containing peer-reviewed extended versions of some of the papers contributed
to the conference. Submissions to it will be by invitation.

REGISTRATION:

The period for registration is open from September 21, 2013 to July 1, 2014.
The registration form can be found at:

http://grammars.grlmc.com/alcob2014/Registration.php

DEADLINES:

Paper submission: February 11, 2014 (23:59 CET) ? EXTENDED ?
Notification of paper acceptance or rejection: March 15, 2014
Final version of the paper for the LNCS/LNBI proceedings: March 22, 2014
Early registration: March 29, 2014
Late registration: June 17, 2014
Starting of the conference: July 1, 2014
End of the conference: July 3, 2014
Submission to the post-conference TCBB special issue: October 3, 2014

QUESTIONS AND FURTHER INFORMATION:

florentinalilica.voicu@urv.cat

POSTAL ADDRESS:

AlCoB 2014
Research Group on Mathematical Linguistics (GRLMC)
Rovira i Virgili University
Av. Catalunya, 35
43002 Tarragona, Spain

Phone: +34 977 559543
Fax: +34 977 558386

ACKNOWLEDGEMENTS:

Departament d?Economia i Coneixement, Generalitat de Catalunya
Universitat Rovira i Virgili




------------------------------

Message: 3
Date: Tue, 4 Feb 2014 13:47:20 +0000
From: Hoff Arild <Arild.Hoff@himolde.no>
To: "dmanet@zpr.uni-koeln.de" <dmanet@zpr.uni-koeln.de>
Subject: [DMANET] Call for participation: LOT - In memory of Professor
Arne L?kketangen
Message-ID:
<48C1E387FCF5814D989B2A9EF0FFDC5A04020B03@Piggulke.himolde.no>
Content-Type: text/plain; charset="iso-8859-1"

Second call for participation

LOT - Logistics, Optimization, and Transportation
=================================================

Molde University College, Molde, Norway
September 1.-2., 2014

LOT is a special EU/MEeting in memory of Professor Arne L?kketangen.

The meeting is open to contributions on both methodological advances and real-world applications within logistics and transportation. Participation is based on submitting a short abstract, limited to 1500 characters. A list of relevant topics for LOT includes, but is not limited to:

- TSP and all variants
- VRP and all variants
- Combining inventory and transportation
- Multi-modal transportation
- Combining manufacturing and transportation
- Transportation Choice Modeling
- Stochastic Programming
- Meta-heuristics
- Matheuristics
- Exact Methods

Invited speakers:
=================================================
Professor Michel Gendreau, ?cole Polytechnique de Montr?al, Montr?al, Canada,
Professor Odd I. Larsen, Molde University College, Molde, Norway,
Professor Stefan Voss, Universit?t Hamburg, Hamburg, Germany.

Important dates:
=================================================
Submission of abstract: April 1, 2014
Notification of acceptance: May 1, 2014
Early registration deadline: June 15, 2014
Late registration deadline: August 1, 2014
Get-together event: August 31, 2014
Conference dates: September 1-2, 2014

For submitting an abstract, please use the following address: https://www.easychair.org/conferences/?conf=lot2014

A post conference special issue is planned, with full papers to be submitted before December 31. 2014

Conference fees:
=================================================
The conference fee will be NOK 1500 for early registration, and NOK 2500 for late registration.
PhD students can register for free, with a confirmation letter from the supervisor or the institution.

Webpage:
=================================================
http://kursinfo.himolde.no/forskningsgrupper/optimering/LOT2014/index.htm

Organizing committee:
=================================================
Svein Br?then
Arild Hoff
Halvard Arntzen
Johan Oppen
Urooj Pasha
Jianyong Jin
Jorge Oyola
Brice Assimizele

Scientific committee:
=================================================
Lars M. Hvattum
Marielle Christiansen
Odd I. Larsen
Arild Hoff
Geir Hasle
David L. Woodruff

Best regards
___________________________
Arild Hoff
Associate Professor
Program Coordinator, Master programs in Logistics
Molde University College
P.O.Box 2110, 6402 Molde, Norway
Phone: +47 71 21 42 02
Mob. +47 91 13 14 10
E-mail: arild.hoff@himolde.no
http://home.himolde.no/~arildh/





------------------------------

Message: 4
Date: Tue, 04 Feb 2014 15:57:13 +0100
From: Kacimi Rahim <kacimi@irit.fr>
To: DMANET@zpr.uni-koeln.de
Subject: [DMANET] CFP: The Second International Workshop on Vehicular
Traffic Management for Smart Cities (VTM 2014)
Message-ID: <52F0FFC9.9010506@irit.fr>
Content-Type: text/plain; charset=windows-1252; format=flowed

Please accept our apologies if you receive multiple copies of this CFP.

----------------------------------------------------------------------------------------

The Second International Workshop on Vehicular Traffic Management for Smart
Cities (VTM 2014) (http://csserver.ucd.ie/~sdjahel/VTM2014/VTM.html)
-----------------------------------------------------------------------------------------

To be held in conjunction with The 2014 IEEE 79th Vehicular Technology
Conference (VTC2014-Spring), 18-21 May 2014, Seoul, Korea
-----------------------------------------------------------------------------------------


CALL FOR PAPERS
---------------
The rapid growth of the number of cars on the roads has created a
plethora of
challenges for road traffic management authorities such as, traffic
congestion, increasing number of accidents, air pollution, etc. Over the
last
decade, researchers from both industry and academia have focused their
efforts
on exploiting advances in sensing and communication technologies to make
the
existing road Traffic Management Systems (TMSs) more efficient.
Their main goal is to improve the traveler?s safety, shorten the travel
time
and reduce the environmental impact.

Road traffic management for smart cities involves monitoring the actual
traffic situation in real-time (including volumes, speeds, incidents, etc.)
and then controlling or influencing the flow using that information in
order
to reduce traffic congestion, deal efficiently with incidents and provide
accurate and reliable traffic information and prediction to both drivers
and
authorities. Moreover, it is foreseen that future smart cities will provide
faster and secure emergency service delivery by granting proper traffic
privileges to emergency vehicles.

This workshop seeks to bring together researchers, scientists and engineers
from various research communities, as well as practitioners and
administrators
who face the challenges of traffic management in smart cities. They are all
welcome to present and discuss their latest research findings, ideas,
simulation tools and applications at the 2014 VTM workshop.

Topics of Interest
------------------
Topics of interest include, but are not limited to:
? Vehicular traffic management
? Vehicle-to-Vehicle (V2V) and Vehicle-to-Infrastructure (V2I) protocols
for smart cities
? Data sensing and gathering techniques in urban environments
? Mobile sensing (privacy, trust management and security issues)
? Data fusion and integration for traffic management systems
(techniques, algorithms, data types, etc.)
? Distributed simulations for large scale urban environments
? Route planning protocols and road traffic prediction mechanisms
? Wireless Sensor Networks (WSNs), Wireless Mesh Networks (WMNs) and VANETs
applied to traffic management systems in smart cities
? Mobility and vehicular traffic measurement, modeling, and simulation
? Security and QoS issues for ITS applications
? V2X feasibility over LTE networks
? M2M communication for data collection in road environment
? Mobile applications for intelligent traffic management
? Deployment issues for smart infrastructure in urban areas
? Vehicular Sensor Networks (VSNs) applications for road traffic management
? Decision making tools for road traffic management
? Electric vehicles

All accepted papers will be published in the proceedings of the VTM2014
workshop and made available through IEEE Xplore.


Important Dates
---------------
Submission deadline ------ 10 February 2014
Acceptance notification ------ 15 March 2014
Camera-ready version ------ 24 March 2014

Keynote speakers
----------------
Prof. Yacine Ghamri-Doudane, L3i Lab, University of La Rochelle, France
Dr. Onur Altintas, Toyota InfoTechnology Center, Japan



Submission guidelines
---------------------
The VTM workshop follows the formatting guidelines of IEEE
VTC2014-Spring. Submissions should be original and limited to 5
double-column pages (Maximum of 2 additional pages allowed - 7 pages in
total - with over-length page fee) in IEEE paper templates. All
submissions should be written in English using 10-point font. Authors
are invited to submit their manuscripts in PDF format through Track
Chair conference system
(http://vtc2014spring-wk.trackchair.com/track/1237/submit). Please
contact Dr. Soufiene Djahel (soufiene.djahel at ucd dot ie), Prof.
Damien Magoni (magoni at labri dot fr) or Dr. Philip Perry (philip.perry
at ucd dot ie) if you have any questions about submitting your manuscripts.

General co-Chairs
-----------------
Soufiene Djahel
University College Dublin, Ireland

Falko Dressler
University of Innsbruck, Austria

John Murphy
University College Dublin, Ireland

TPC co-Chairs
-------------
Damien Magoni
University of Bordeaux 1, France

Philip Perry
University College Dublin, Ireland

Publicity Chair
---------------
Rahim Kacimi
Paul Sabatier University, France

TPC members
-----------
Wei Wei, Xi?an Jiao Tong University, China
Imad Jawhar, United Arab Emirates University, UAE
Amit Pande, University of California Davis, USA
M?lanie Bouroche, Trinity College Dublin, Ireland
Celimuge Wu, University of Electro-communications, Japan
Yassine Hadjadj Aoul, IRISA, France
Abdelmalik Bachir, Imperial College London, UK
Dalil Moad, City Passenger, France
Sidi-Mohammed Senouci, University of Bourgogne, France
Lyes Khoukhi, University of Troyes, France
Christoph Sommer, University of Innsbruck, Austria
Sa?d Gharout, Orange Labs, France
Djamel Djenouri, CERIST Research Center, Algeria
Ali Hamieh, University of Nevada, USA
Hassine Moungla, University Paris Descartes, France
Yacine Belhoul, CERIST Research Center, Algeria
Intesab Hussain, QUEST, Nawabshah, Pakistan
Mikael Asplund, Link?ping University, Sweden
Nafa? Jabeur, German University of Technology in Oman (GUtech), Oman
Huaqun Guo, Institute for Infocomm Research, A*STAR, Singapore
Ahcene Bendjoudi, CERIST Research Center, Algeria
Gabriel-Miro Muntean, Dublin City University, Ireland
Rahim Kacimi, Paul Sabatier University, France
Fen Zhou, Avignon University, France
Said Yahiaoui, CERIST Research Center, Algeria
Michael Feiri, University of Twente, Netherlands


------------------------------

Message: 5
Date: Tue, 4 Feb 2014 19:37:00 +0200
From: "Dimitrios Thilikos" <sedthilk@math.uoa.gr>
To: dmanet@zpr.uni-koeln.de
Subject: [DMANET] Special issue of Discrete Applied Mathematics
dedicated to GROW 2013
Message-ID:
<cc9a067a8070169e7620e180917ef8fa.squirrel@webmail02.uoa.gr>
Content-Type: text/plain;charset=utf-8

Dear colleague,

We would like to invite you to submit a paper for publication in a special
issue of Discrete Applied Mathematics dedicated to the topics of the
recent workshop held in Santorini, Greece on October 9-11, 2013: Sixth
Workshop on Graph Classes, Optimization, and Width Parameters (GROW 2013).

The workshop was the most recent in the series initiated twelve years ago
in Barcelona (Bellaterra) and continued in Prague in 2005, Eugene in 2007,
Bergen in 2019, and Daejeon in 2011. The first four meetings resulted in
publication of special issues DAM 160(6), DAM 145(2), DAM 157(12), and DAM
158(7). The special issue of DAM dedicated to the fifth workshop is about
to hit the presses and will appear in early 2014.

The authorship of papers submitted to this special issue is not limited to
the participants of the Santorini workshop; this invitation is being sent
to all those who were invited to the workshop. We hope to include other
recent results in these research areas, as well. As it was the case of the
previous issues, all submissions will be duly refereed with the usual high
standards.

The submission deadline is March 1, 2014.

Please submit your paper through the web page:
http://ees.elsevier.com/dam/

If you have used this system before, you can use your existing login name
and password for this submission; otherwise you will need to create an
account.

After logging in, the first thing you are asked to do is to select an
article type. Please be sure to select:
"SI:DAM_GROW 2013 Santorini"
from the list that appears for "Choose an article type". And then follow
the instructions on the following pages. Please do not forget to approve
the pdf file that is created at the end of your session.

We are looking forward to receiving your paper! Please end us a brief
message letting us know your intentions by mid January.

Best regards,


The Special Issue Editors:

Andrzej Proskurowski <andrzej@cs.uoregon.edu>
Dimitrios M. Thilikos <sedthilk@thilikos.info>
Pinar Heggernes <Pinar.Heggernes@ii.uib.no>


This announcement is also available at
http://grow2013.isoftcloud.gr/Special_issue_of_Discrete_Applied_Mathematics_for_GROW_2013



------------------------------

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